General Information
DRAVP ID DRAVPe00173
Peptide Name P8
Sequence GTKALTAVIPLTEEAEC
Sequence Length 17
UniProt ID No entry found
Taxon ID None
Source Synthetic construct(derived from Pep-A)
Validation Experimentally Validated
Origin Information
Gene Name/ID Not Available
GenBank Not Available
Amino Acid position Not Available
Domain Accession ID Not Available
Nucleotide sequence ID Not Available
Molecular Type Not Available
Chromosomal Position Not available
Activity Information
Target Organism HIV
Assay RT-Polymerase Assay
Activity
Hemolytic Activity No hemolysis information or data found in the reference(s) presented in this entry
Cytotoxicity
Binding Target Reverse Transcriptase
Mechanism HIV-1 reverse transcriptase (RT) plays an essential multifunctional role in the replication of the virus, by catalyzing the synthesis of double-stranded DNA from the single strand retroviral RNA genome.The peptide could inhibit the activity of reverse transcriptase.
Structure Information
PDB ID None
Predicted Structure Download DRAVPe00173
Linear/Cyclic Linear
N-terminal Modification Free
C-terminal Modification Free
Other Modification None
Stereochemistry L
Physicochemical Information
Formula C75H128N18O27S
Absent amino acids DFHMNQRSWY
Common amino acids AET
Mass 1746.01
Pl 4.25
Basic residues 1
Acidic residues 3
Hydrophobic residues 7
Net charge -2
Boman Index -724
Hydrophobicity 33.53
Aliphatic Index 103.53
Half Life
Extinction Coefficient cystines 0
Absorbance 280nm 0
Polar residues 5
Literature Information
Literature 1
Title A new generation of peptide-based inhibitors targeting HIV-1 reverse transcriptase conformational flexibility.
Pubmed ID 18952602
Reference J Biol Chem. 2009 Jan 2;284(1):254-264.
Author Agopian A, Gros E, Aldrian-Herrada G, Bosquet N, Clayette P, Divita G.