General Information
DRAVP ID DRAVPe00280
Peptide Name Circulin-C (CIRC; Plant defensin)
Sequence GIPCGESCVFIPCITSVAGCSCKSKVCYRN
Sequence Length 30
UniProt ID P84641
Source Chassalia parviflora
Activity Information
Target Organism HIV
Assay
Activity
Hemolytic Activity No hemolysis information or data found in the reference(s) presented in this entry
Cytotoxicity
Binding Target Not found
Mechanism No machanism information found in the reference(s) presented in this entry
Structure Information
PDB ID None
Predicted Structure Download DRAVPe00280
Linear/Cyclic Cyclic
N-terminal Modification Cyclization (N termini to C termini)
C-terminal Modification Cyclization (N termini to C termini)
Other Modification Disulfide bonds between Cys4 and Cys20, Cys8 and Cys22,Cys13 and Cys27.
Stereochemistry L
Physicochemical Information
Formula C131H214N36O40S6
Absent amino acids DHLMQW
Common amino acids C
Mass 3125.72
Pl 8.33
Basic residues 3
Acidic residues 1
Hydrophobic residues 8
Net charge 2
Boman Index -1361
Hydrophobicity 56
Aliphatic Index 71.33
Half Life
Extinction Coefficient cystines 1865
Absorbance 280nm 64.31
Polar residues 16
Literature Information
Literature 1
Title Cyclotides as natural anti-HIV agents.
Pubmed ID 18008336
Reference Biopolymers. 2008;90(1):51-60.
Author Ireland DC, Wang CK, Wilson JA, Gustafson KR, Craik DJ.
Literature 2
Title New circulin macrocyclic polypeptides from Chassalia parvifolia.
Pubmed ID 10691702
Reference J Nat Prod. 2000 Feb;63(2):176-8.
Author Gustafson KR, Walton LK, Sowder RC Jr, Johnson DG, Pannell LK, Cardellina JH Jr, Boyd MR.