General Information
DRAVP ID DRAVPe00680
Peptide Name P-55
Sequence WEQKIEELLKKAEEQQKKNEEELKK
Sequence Length 25
UniProt ID P03377
Source Synthetic construct
Activity Information
Target Organism HIV
Assay cell-fusion assay,single-cycle infection assay
Activity
Hemolytic Activity No hemolysis information or data found in the reference(s) presented in this entry
Cytotoxicity
Binding Target membrane
Mechanism The peptide acts by binding to the heptad repeat 1 (HR1) region of gp41 and preventing the interaction of the HR1 and HR2 domains, which is required for virus–cell fusion.(By similar)
Structure Information
PDB ID None
Predicted Structure Download DRAVPe00680
Linear/Cyclic Linear
N-terminal Modification Acetylation
C-terminal Modification Amidation
Other Modification None
Stereochemistry L
Physicochemical Information
Formula C139H231N37O46
Absent amino acids CDFGHMPRSTVY
Common amino acids E
Mass 3156.58
Pl 5.3
Basic residues 7
Acidic residues 8
Hydrophobic residues 6
Net charge -1
Boman Index -9277
Hydrophobicity -210
Aliphatic Index 66.4
Half Life
Extinction Coefficient cystines 5500
Absorbance 280nm 229.17
Polar residues 1
Literature Information
Literature 1
Title Structural and Functional Characterization of Membrane Fusion Inhibitors with Extremely Potent Activity against Human Immunodeficiency Virus Type 1 (HIV-1), HIV-2, and Simian Immunodeficiency Virus.
Pubmed ID 30089693
Reference J Virol. 2018 Sep 26;92(20):e01088-18.
Author Chong H, Zhu Y, Yu D, He Y.