General Information


DRAVP ID  DRAVPe01526

Peptide Name   RatNP-1

Sequence  VTCYCRRTRCGFRERLSGACGYRGRIYRLCCR

Sequence Length  32

UniProt ID  Q62716 

Taxon ID  None

Source  Rattus norvegicus

Validation   Experimentally Validated



Origin Information


Gene Name/ID  Not Available

GenBank  Not Available

Amino Acid position  Not Available

Domain Accession ID  Not Available

Nucleotide sequence ID  Not Available

Molecular Type  Not Available

Chromosomal Position  Not Available



Activity Information


Target Organism  HSV

Assay 

Activity 

  • [Ref.12543649]HSV-2:inhibition of HSV-2 infection in Vero cells(98.7%±0.7% inhibition at 25 μg/ ml).

Hemolytic Activity  No hemolysis information or data found in the reference(s) presented in this entry

Cytotoxicity 

  • [Ref.12543649]No cytotoxic effect on CaSki cells was observed at the concentration of 25 or 100 μg/ml.

Binding Target  membrane

Mechanism  NP-1 inactivates HSV and prevents viral entry and cell-to-cell spread. NP-1 blocks fusion events important in HSV acquisition and transmission.



Structure Information


PDB ID  None

Predicted Structure Download  DRAVPe01526

Linear/Cyclic  Cyclic

N-terminal Modification  Free

C-terminal Modification  Free

Other Modification  Disulfide bonds between Cys3 and Cys31,Cys5 and Cys20,Cys10 and Cys30.

Stereochemistry  L



Physicochemical Information


Formula  C158H261N59O41S6

Absent amino acids  DHKMNPQW

Common amino acids  R

Mass  3835.54

Pl  9.99

Basic residues  9

Acidic residues  1

Hydrophobic residues  6

Net charge  8

Boman Index  -11502

Hydrophobicity  -49.38

Aliphatic Index  48.75

Half Life 

  •     Mammalian:100 hour
  •     Yeast:>20 hour
  •     E.coli:>10 hour

Extinction Coefficient cystines  4845

Absorbance 280nm  156.29

Polar residues  16



Literature Information


Literature 1

Title   NP-1, a rabbit alpha-defensin, prevents the entry and intercellular spread of herpes simplex virus type 2. 

Pubmed ID   12543649

Reference   Antimicrob Agents Chemother. 2003 Feb;47(2):494-500.

Author   Sinha S, Cheshenko N, Lehrer RI, Herold BC.

DOI   10.1128/AAC.47.2.494-500.2003