General Information
DRAVP ID DRAVPe01558
Peptide Name RTD-3 (rhesus theta defensin 3)
Sequence GFCRCICTRGFCRCICTR
Sequence Length 18
UniProt ID P82270,Q9TU01
Source Macaca mulatta (Rhesus macaque)
Activity Information
Target Organism HIV
Assay
Activity
Hemolytic Activity No hemolysis information or data found in the reference(s) presented in this entry
Cytotoxicity No cytotoxicity information found in the reference(s) presented
Binding Target gp120,CD4
Mechanism The peptide binds to gp120 and CD4, thereby inhibiting HIV entry.
Structure Information
PDB ID None
Predicted Structure Download DRAVPe01558
Linear/Cyclic Cyclic
N-terminal Modification Cyclization (N termini to C termini)
C-terminal Modification Cyclization (N termini to C termini)
Other Modification Disulfide bonds between Cys3 and Cys16,Cys5 and Cys14,Cys7 and Cys12.
Stereochemistry L
Physicochemical Information
Formula C84H140N30O21S6
Absent amino acids ADEHKLMNPQSVWY
Common amino acids C
Mass 2098.58
Pl 9.01
Basic residues 4
Acidic residues 0
Hydrophobic residues 4
Net charge 4
Boman Index -3946
Hydrophobicity 52.22
Aliphatic Index 43.33
Half Life
Extinction Coefficient cystines 375
Absorbance 280nm 22.06
Polar residues 10
Literature Information
Literature 1
Title Activity of alpha- and theta-defensins against primary isolates of HIV-1.
Pubmed ID 15210812
Reference J Immunol. 2004 Jul 1;173(1):515-20.
Author Wang W, Owen SM, Rudolph DL, Cole AM, Hong T, Waring AJ, Lal RB, Lehrer RI.