General Information
DRAVP ID DRAVPe01563
Peptide Name RC-116
Sequence RYICRCICGRGICRCICG
Sequence Length 18
UniProt ID
No entry found
Source Synthetic construct
Other Link DRAVPa0165
Activity Information
Target Organism HIV
Assay
Activity
- [Ref.15588337]HIV-1 92US714:inhibition of virus replication in JC53-BL cells(IC50=9.5 µg/ml);
- HIV-1 93US151:inhibition of virus replication in JC53-BL cells(IC50=1.3 µg/ml);
- HIV-1 92HT593:inhibition of virus replication in JC53-BL cells(IC50=3.7 µg/ml);
- HIV-1 92US727:inhibition of virus replication in JC53-BL cells(IC50=4.6µg/ml);
- HIV-1 5148-1382:inhibition of virus replication in JC53-BL cells(IC50=5.2 µg/ml);
- HIV-1 5157-1326:inhibition of virus replication in JC53-BL cells(IC50=4.8 µg/ml);
- HIV-1 5157-35097:inhibition of virus replication in JC53-BL cells(IC50=5.2 µg/ml);
- HIV-1 193317:inhibition of virus replication in JC53-BL cells(IC50=7.1 µg/ml);
- HIV-1 196554:inhibition of virus replication in JC53-BL cells(IC50=2.4 µg/ml);
- HIV-1 196531:inhibition of virus replication in JC53-BL cells(IC50=7.8 µg/ml);
- HIV-1 92UG037:inhibition of virus replication in JC53-BL cells(IC50=3.1 µg/ml);
- HIV-1 192431:inhibition of virus replication in JC53-BL cells(IC50=2.4 µg/ml);
- HIV-1 193358:inhibition of virus replication in JC53-BL cells(IC50=7.8 µg/ml);
- HIV-1 98CN009:inhibition of virus replication in JC53-BL cells(IC50>10 µg/ml);
- HIV-1 98TZ017:inhibition of virus replication in JC53-BL cells(IC50>10 µg/ml);
- HIV-1 93UG053:inhibition of virus replication in JC53-BL cells(IC50=6.6 µg/ml);
- HIV-1 92UG005:inhibition of virus replication in JC53-BL cells(IC50=5.2 µg/ml);
- HIV-1 94UG114:inhibition of virus replication in JC53-BL cells(IC50=4.2 µg/ml);
- HIV-1 HM14:inhibition of virus replication in JC53-BL cells(IC50=3.3 µg/ml);
- HIV-1 93TH060:inhibition of virus replication in JC53-BL cells(IC50=6.5 µg/ml);
- HIV-1 HM16:inhibition of virus replication in JC53-BL cells(IC50=2.9 µg/ml);
- HIV-1 RU132:inhibition of virus replication in JC53-BL cells(IC50=4.9 µg/ml);
- HIV-1 RU570:inhibition of virus replication in JC53-BL cells(IC50=9.6 µg/ml);
- HIV-1 92BR023:inhibition of virus replication in JC53-BL cells(IC50=2.9 µg/ml);
- HIV-1 92RW009:inhibition of virus replication in JC53-BL cells(IC50=7.8 µg/ml);
- HIV-1 92RW024:inhibition of virus replication in JC53-BL cells(IC50=6.6 µg/ml);
- HIV-1 93UG059:inhibition of virus replication in JC53-BL cells(IC50=5.7 µg/ml).
Hemolytic Activity
No hemolysis information or data found in the reference(s) presented in this entry
Cytotoxicity
No cytotoxicity information found in the reference(s) presented
Binding Target gp120,CD4
Mechanism The peptide binds to gp120 and CD4, thereby inhibiting HIV entry.
Structure Information
PDB ID
None
Predicted Structure Download
DRAVPe01563
Linear/Cyclic Cyclic
N-terminal Modification Free
C-terminal Modification Free
Other Modification Disulfide bonds between Cys4 and Cys17,Cys6 and Cys15,Cys8 and Cys13.
Stereochemistry L
Physicochemical Information
Formula C81H142N30O20S6
Absent amino acids ADEFHKLMNPQSTVW
Common amino acids C
Mass 2048.57
Pl 8.98
Basic residues 4
Acidic residues 0
Hydrophobic residues 4
Net charge 4
Boman Index -2964
Hydrophobicity 69.44
Aliphatic Index 86.67
Half Life
- Mammalian:1 hour
- Yeast:2 min
- E.coli:2 min
Extinction Coefficient cystines 1865
Absorbance 280nm 109.71
Polar residues 10
Literature Information
Literature 1
Title RC-101, a retrocyclin-1 analogue with enhanced activity against primary HIV type 1 isolates.
Pubmed ID
15588337
Reference AIDS Res Hum Retroviruses. 2004 Nov;20(11):1157-65.
Author Owen SM, Rudolph DL, Wang W, Cole AM, Waring AJ, Lal RB, Lehrer RI.
DOI
10.1089/aid.2004.20.1157