General Information


DRAVP ID  DRAVPe01956

Peptide Name   Dermaseptin-4

Sequence  ALWMTLLKKVLKAAAKAALNAVLVGANA

Sequence Length  28

UniProt ID  P80280 

Taxon ID  None

Source  Phyllomedusa sauvagii

Validation   Experimentally Validated



Origin Information


Gene Name/ID  Not Available

GenBank  Not Available

Amino Acid position  Not Available

Domain Accession ID  Not Available

Nucleotide sequence ID  Not Available

Molecular Type  Not Available

Chromosomal Position  Not Available



Activity Information


Target Organism  HIV

Assay  Chemiluminescence Reporter Gene Assay

Activity 

  • [Ref.15780876]human immunodeficiency virus type 1 (HIV-1):Inhibition of viral infection in Vero P4-CCR5 cells(IC50=2 µM).

Hemolytic Activity  No hemolysis information or data found in the reference(s) presented in this entry

Cytotoxicity 

  • [Ref.15780876]P4-CCR5 cells:CC50=5.6 μM.

Binding Target  viral membrane

Mechanism  exerts a selective activity on viral particles and disturbs their organization by breaking the viral membrane, leading to the exposure of HIV-1 core and its dissociation. 



Structure Information


PDB ID  None

Predicted Structure Download  No predicted structure available

Linear/Cyclic  Linear

N-terminal Modification  Free

C-terminal Modification  Amidation

Other Modification  None

Stereochemistry  L



Physicochemical Information


Formula  C132H229N35O32S

Absent amino acids  CDEFHIPQRSY

Common amino acids  A

Mass  2850.55

Pl  10.48

Basic residues  4

Acidic residues  0

Hydrophobic residues  19

Net charge  4

Boman Index  2550

Hydrophobicity  103.21

Aliphatic Index  146.79

Half Life 

  •     Mammalian:4.4 hour
  •     Yeast:>20 hour
  •     E.coli:>10 hour

Extinction Coefficient cystines  5500

Absorbance 280nm  203.7

Polar residues  4



Literature Information


Literature 1

Title   The antimicrobial peptide dermaseptin S4 inhibits HIV-1 infectivity in vitro. 

Pubmed ID   15780876

Reference   Virology. 2005 Apr 10;334(2):264-75. 

Author   Lorin C, Saidi H, Belaid A, Zairi A, Baleux F, Hocini H, Bélec L, Hani K, Tangy F.

DOI   10.1016/j.virol.2005.02.002