General Information
DRAVP ID DRAVPe02040
Peptide Name Surfactin
Sequence L-Glu- L-Val- D-Leu- L-Ala- L-Asp- D-Leu- L-Val
Sequence Length 6
UniProt ID No entry found
Taxon ID None
Source Synthetic Construct(derived from Bacillus subtilis)
Validation Experimentally Validated
Origin Information
Gene Name/ID Not Available
GenBank Not Available
Amino Acid position Not Available
Domain Accession ID Not Available
Nucleotide sequence ID Not Available
Molecular Type Not Available
Chromosomal Position Not Available
Activity Information
Target Organism PEDV
Assay Plaque reduction assay
Activity
Hemolytic Activity
Cytotoxicity
Binding Target Membrane
Mechanism surfactin exerts its antiviral effects by inhibiting viral membrane fusion. Membrane fusion between the viral envelope and the cell membrane is essential for enveloped viruses to invade host cells. Surfactin can act directly on virus particles by insertion into the viral envelopes’ lipid bilayer and thereby reduce the membrane fusion rate.
Structure Information
PDB ID None
Predicted Structure Download No predicted structure available
Linear/Cyclic Linear
N-terminal Modification palmitoylation
C-terminal Modification Free
Other Modification None
Stereochemistry L
Physicochemical Information
Formula C28H48N6O11
Absent amino acids RNCQGHIKMFPSTWWYOU
Common amino acids V
Mass 644.72
Pl 3.67
Basic residues 0
Acidic residues 2
Hydrophobic residues 5
Net charge -2
Boman Index 0.7771
Hydrophobicity 1.167
Aliphatic Index 178.33
Half Life
Extinction Coefficient cystines 0
Absorbance 280nm 0
Polar residues 2
Literature Information
Literature 1
Title Synthetic surfactin analogues have improved anti-PEDV properties
Pubmed ID 30973929
Reference PloS one, 14(4), e0215227.
Author Yuan, L., Zhang, S., Peng, J., Li, Y., & Yang, Q. (2019).