General Information


DRAVP ID  DRAVPe02271

Peptide Name   Labyrinthopeptin A1

Sequence  SNASVWECCSTGSWVPFTCC

Sequence Length  20

UniProt ID  C0MP59 

Taxon ID  182080 

Source  Actinomycete Actinomadura namibiensis DSM 6313

Validation   Experimentally Validated



Origin Information


Gene Name/ID  labA1

GenBank  Not Available

Amino Acid position  21-40

Domain Accession ID  Not Available

Nucleotide sequence ID  Not Available

Molecular Type  Not Available

Chromosomal Position  Not Available



Activity Information


Target Organism  DENV,ZIKV,WNV,HCV,CHIKV,KSHV,CMV,HSV-2,HIV-1

Assay  Antiviral Assay

Activity 

  • [Ref:3166638]CHIKV IC₅₀ = 2.2 μM,CHIKV (pseudotype):IC₅₀ = 1.8 μM,DENV-1 IC₅₀ = 0.8 μM,DENV-2 (Huh-7, high content imaging):IC₅₀ = 1.8 μM,DENV-2 (Huh-7, qRT-PCR) :IC₅₀ = 2.0 μM,DENV-2 (MDDC, flow cytometry): IC₅₀ = 0.4 μM,DENV-2 (MDDC, qRT-PCR): IC₅₀ = 0.3 μM,DENV-3 IC₅₀ = 1.1 μM,DENV-4: IC₅₀ = 0.3 μM,HCMV:IC₅₀ = 1.3 μM,HCV:IC₅₀ = 1.1 μM,HIV (laboratory strain, MT-4 T cells);IC₅₀ = 1.9 μM,HIV (laboratory strain, PBMC):IC₅₀ = 1.7 μM,HIV (laboratory strain, MDM):IC₅₀ = 2.4 μM,HIV (clinical isolate, PBMC):IC₅₀ = 1.0 μM,HSV-1:IC₅₀ = 1.6 μM,HSV-1 (Tk-deficient):IC₅₀ = 1.9 μM,HSV-2:IC₅₀ = 0.4 μM,HSV-2 (Tk-deficient):IC₅₀ = 0.3 μM,KSHV:IC₅₀ = 2.0 μM,TBEV:IC₅₀ = 24.1 μM,WNV:IC₅₀ = 0.2 μM,ZIKV-976 (Huh-7, high content imaging):IC₅₀ = 2.0 μM,ZIKV-976 (Huh-7, qRT-PCR):IC₅₀ = 1.8 μM,ZIKV-H/PF-2013 (Huh-7, high content imaging):IC₅₀ = 1.6 μM,ZIKV-H/PF-2013 (Huh-7, qRT-PCR):IC₅₀ = 1.6 μM.

Hemolytic Activity  No hemolysis information or data found in the reference(s) presented in this entry

Cytotoxicity 

  • [Ref:3166638]Labyrinthopeptins exhibited low cytotoxicity and had favorable pharmacokinetic properties in mice (half-life [t1/2] = 10.0 h),

Binding Target  Membrane

Mechanism  LabyA1 exert the antiviral function by disrupting viral envelopes (virolysis).



Structure Information


PDB ID  None

Predicted Structure Download 

Linear/Cyclic  Linear

N-terminal Modification  Free

C-terminal Modification  Free

Other Modification  None

Stereochemistry  L



Physicochemical Information


Formula  C92H131N23O30S4

Absent amino acids  RDPHILKMYOU

Common amino acids  CS

Mass  2167.43

Pl  4

Basic residues  0

Acidic residues  1

Hydrophobic residues  6

Net charge  -1

Boman Index  0.43

Hydrophobicity  0.38

Aliphatic Index  34

Half Life 

  •     Mammalian:1.9hours
  •     Yeast:>20hours
  •     E.coli:>10hours

Extinction Coefficient cystines  11250

Absorbance 280nm  5.19

Polar residues  12



Literature Information


Literature 1

Title   Labyrinthopeptins Exert Broad-Spectrum Antiviral Activity through Lipid-Binding-Mediated Virolysis

Pubmed ID   31666384

Reference   Journal of virology, 94(2), e01471-19

Author   Prochnow, H., Rox, K., Birudukota, N. V. S., Weichert, L., Hotop, S. K., Klahn, P., Mohr, K., Franz, S., Banda, D. H., Blockus, S., Schreiber, J., Haid, S., Oeyen, M., Martinez, J. P., Süssmuth, R. D., Wink, J., Meyerhans, A., Goffinet, C., Messerle, M., Schulz, T. F., … Brönstrup, M. (2020)

DOI   10.1128/JVI.01471-19

Literature 2

Title   The lantibiotic peptide labyrinthopeptin A1 demonstrates broad anti-HIV and anti-HSV activity with potential for microbicidal applications

Pubmed ID   23724015

Reference   PloS one, 8(5), e64010.

Author   Férir, G., Petrova, M. I., Andrei, G., Huskens, D., Hoorelbeke, B., Snoeck, R., Vanderleyden, J., Balzarini, J., Bartoschek, S., Brönstrup, M., Süssmuth, R. D., & Schols, D. (2013).

DOI   10.1371/journal.pone.0064010