General Information


DRAVP ID  DRAVPe02680

Peptide Name   HCVc11-36

Sequence  TKRNTNRRPQDVKFPGGGQIVGGVYL

Sequence Length  26

UniProt ID  P26663 

Taxon ID  None

Source  HCV core protein

Validation   Experimentally Validated



Origin Information


Gene Name/ID  Not Available

GenBank  Not Available

Amino Acid position  Not Available

Domain Accession ID  Not Available

Nucleotide sequence ID  Not Available

Molecular Type  Not Available

Chromosomal Position  Not Available



Activity Information


Target Organism  HCV

Assay  Luciferase assay

Activity 

  • [Ref:20862261]HCV:IC50=High

Hemolytic Activity  No hemolysis information or data found in the reference(s) presented in this entry

Cytotoxicity  No cytotoxicity information found in the reference(s) presented

Binding Target  Membrane

Mechanism  Inhibit Replication



Structure Information


PDB ID  None

Predicted Structure Download  No predicted structure available

Linear/Cyclic  Linear

N-terminal Modification  Free

C-terminal Modification  Free

Other Modification  None

Stereochemistry  L



Physicochemical Information


Formula  H78C121N28O23S1

Absent amino acids  HMW

Common amino acids  GRV

Mass  1870.0573

Pl  10.9035539627075

Basic residues  5

Acidic residues  1

Hydrophobic residues  3

Net charge  2.84636856168572

Boman Index  1.293

Hydrophobicity  -1.84

Aliphatic Index  0

Half Life 

  •     Mammalian:30hours
  •     Yeast:15hours
  •     E.coli:28hours

Extinction Coefficient cystines  1490

Absorbance 280nm  0.796767029545031

Polar residues  12



Literature Information


Literature 1

Title   Hepatitis C virus core-derived peptides inhibit genotype 1b viral genome replication via interaction with DDX3X.

Pubmed ID   20862261

Reference   PLoS One. 2010

Author   Sun C, Pager CT, Luo G, Sarnow P, Cate JH.

DOI   10.1371/journal.pone.0012826