General Information
DRAVP ID DRAVPe00082
Peptide Name Vpr-4 R8
Sequence EAIIRILQQLLFIHFRIGRRRRRRRR
Sequence Length 26
UniProt ID No entry found
Source Synthetic construct(derived from HIV-1 gene products(Vpr))
Activity Information
Target Organism HIV
Assay Integrase assay
Activity
Hemolytic Activity No hemolysis information or data found in the reference(s) presented in this entry
Cytotoxicity
Binding Target Integrase
Mechanism IN is an essential enzyme for the stable infection of host cells because it catalyzes the insertion of viral DNA inside the pre-integration complex (PIC) into the genome of host cells in two successive reactions, designated as strand transfer and 3′-end-processing. The peptide could inhibit the activity of integrase and thus inhibit virus replication.
Structure Information
PDB ID None
Predicted Structure Download DRAVPe00082
Linear/Cyclic Linear
N-terminal Modification Acetylation
C-terminal Modification Amidation
Other Modification None
Stereochemistry L
Physicochemical Information
Formula C152H266N60O31
Absent amino acids CDKMNPSTVWY
Common amino acids R
Mass 3430.17
Pl 12.6
Basic residues 11
Acidic residues 1
Hydrophobic residues 11
Net charge 10
Boman Index -12368
Hydrophobicity -68.46
Aliphatic Index 123.85
Half Life
Extinction Coefficient cystines 0
Absorbance 280nm 0
Polar residues 1
Literature Information
Literature 1
Title Peptide HIV-1 integrase inhibitors from HIV-1 gene products.
Pubmed ID 20586421
Reference J Med Chem. 2010 Jul 22;53(14):5356-60.
Author Suzuki S, Urano E, Hashimoto C, Tsutsumi H, Nakahara T, Tanaka T, Nakanishi Y, Maddali K, Han Y, Hamatake M, Miyauchi K, Pommier Y, Beutler JA, Sugiura W, Fuji H, Hoshino T, Itotani K, Nomura W, Narumi T, Yamamoto N, Komano JA, Tamamura H.