General Information


DRAVP ID  DRAVPe00084

Peptide Name   Vpr 53-67

Sequence  TWAGVEAIIRILQQL

Sequence Length  15

UniProt ID  No entry found

Source  Synthetic construct(derived from HIV-1 viral protein R (Vpr))



Activity Information


Target Organism  HIV

Assay  Dot-blot binding assay

Activity 

  • [Ref.17490682]HIV-1:inhibit the activity of RNA-dependent DNA polymerase(IC50=0.88 µM);inhibit the activity of DNA-dependent DNA polymerase(IC50=0.88 µM);inhibit the activity of Rnase H(IC50=6.9 µM);
  • Inhibition of 3′-end processing catalyzed by integrase(IC50>200 µM);inhibition of strand transfer catalyzed by integrase(IC50=144 µM);inhibition of disintegration catalyzed by integrase(IC50=27 µM).

Hemolytic Activity  No hemolysis information or data found in the reference(s) presented in this entry

Cytotoxicity 

  • No cytotoxicity information or data found in the reference(s) presented in this entry

Binding Target  Integrase,Reverse Transcriptase

Mechanism  The viral enzymes RT and IN have cardinal roles in the early stages of the replication of retroviruses and retrotransposons. The peptide derived from viral protein R (Vpr) could inhibit integrase(IN) and Reverse Transcriptase(RT) and thus inhibit the replication of HIV-1.



Structure Information


PDB ID  None

Predicted Structure Download  DRAVPe00084

Linear/Cyclic  Linear

N-terminal Modification  Free

C-terminal Modification  Free

Other Modification  None

Stereochemistry  L



Physicochemical Information


Formula  C79H131N21O21

Absent amino acids  CDFHKMNPSY

Common amino acids  I

Mass  1711.04

Pl  5.66

Basic residues  1

Acidic residues  1

Hydrophobic residues  9

Net charge  0

Boman Index  15

Hydrophobicity  79.33

Aliphatic Index  162.67

Half Life 

  •     Mammalian:7.2 hour
  •     Yeast:>20 hour
  •     E.coli:>10 hour

Extinction Coefficient cystines  5500

Absorbance 280nm  392.86

Polar residues  2



Literature Information


Literature 1

Title   Inhibition of the activities of reverse transcriptase and integrase of human immunodeficiency virus type-1 by peptides derived from the homologous viral protein R (Vpr).

Pubmed ID   17490682

Reference   J Mol Biol. 2007 Jun 22;369(5):1230-43.

Author   Gleenberg IO, Herschhorn A, Hizi A.

DOI   10.1016/j.jmb.2007.03.073