General Information
DRAVP ID DRAVPe00162
Peptide Name P6-2
Sequence LCDCPNGPWVWVPAFCQAVG
Sequence Length 20
UniProt ID No entry found
Taxon ID None
Source Synthetic construct(derived from region of GB virus C glycoprotein E2)
Validation Experimentally Validated
Origin Information
Gene Name/ID Not Available
GenBank Not Available
Amino Acid position Not Available
Domain Accession ID Not Available
Nucleotide sequence ID Not Available
Molecular Type Not Available
Chromosomal Position Not available
Activity Information
Target Organism HIV
Assay Luciferase assay
Activity
Hemolytic Activity No hemolysis information or data found in the reference(s) presented in this entry
Cytotoxicity
Binding Target membrane
Mechanism The possible mechanism of action is that the peptide could inhibit membrane fusion and inhibit HIV-1 replication in cells.
Structure Information
PDB ID None
Predicted Structure Download No predicted structure available
Linear/Cyclic Linear
N-terminal Modification Acetylation
C-terminal Modification Free
Other Modification None
Stereochemistry L
Physicochemical Information
Formula C99H140N24O25S3
Absent amino acids EHIKMRSTY
Common amino acids CPV
Mass 2162.53
Pl 3.8
Basic residues 0
Acidic residues 1
Hydrophobic residues 9
Net charge -1
Boman Index 1312
Hydrophobicity 62
Aliphatic Index 73
Half Life
Extinction Coefficient cystines 11125
Absorbance 280nm 585.53
Polar residues 6
Literature Information
Literature 1
Title Peptides derived from a distinct region of GB virus C glycoprotein E2 mediate strain-specific HIV-1 entry inhibition.
Pubmed ID 21543477
Reference J Virol. 2011 Jul;85(14):7037-47.
Author Koedel Y, Eissmann K, Wend H, Fleckenstein B, Reil H.