General Information

General Information

DRAVP ID DRAVPe00265

Peptide Name 267227

Sequence TTWEAWDRAIAEYAARIEALIRAAQEQQEKLEAALREL

Sequence Length 38

UniProt ID No entry found

Source Synthetic construct

Other Link DRAVPa1317

Activity Information

Target Organism HIV

Assay MAGI/cMAGI infectivity assay

Activity

[Ref.17640899]HIV IIIB:inhibition of virus infection on CEM4 cells(IC50=0.012 μg/ml);
HIV 098:inhibition of virus infection on CEM4 cells(IC50=0.045μg/ml);
HIV 098-T20:inhibition of virus infection on CEM4 cells(IC50=0.028 μg/ml);
HIV 098-T1249:inhibition of virus infection on CEM4 cells(IC50=0.025 μg/ml);
HIV 098-T651:inhibition of virus infection on CEM4 cells(IC50=0.044 μg/ml).

Hemolytic Activity No hemolysis information or data found in the reference(s) presented in this entry

Cytotoxicity

No cytotoxicity information or data found in the reference(s) presented in this entry

Binding Target membrane

Mechanism The peptide acts by binding to the heptad repeat 1 (HR1) region of gp41 and preventing the interaction of the HR1 and HR2 domains, which is required for virus–cell fusion.

Structure Information

PDB ID None

Predicted Structure Download DRAVPe00265

Linear/Cyclic Linear

N-terminal Modification Acetylation

C-terminal Modification Amidation

Other Modification None

Stereochemistry L

Physicochemical Information

Formula C195H310N56O61

Absent amino acids CFGHMNPSV

Common amino acids A

Mass 4414.94

Pl 4.64

Basic residues 5

Acidic residues 8

Hydrophobic residues 19

Net charge -3

Boman Index -8632

Hydrophobicity -47.89

Aliphatic Index 98.16

Half Life

Mammalian:7.2 hour
Yeast:>20 hour
E.coli:>10 hour

Extinction Coefficient cystines 12490

Absorbance 280nm 337.57

Polar residues 3

Literature Information

Literature 1

Title Design of helical, oligomeric HIV-1 fusion inhibitor peptides with potent activity against enfuvirtide-resistant virus.

Pubmed ID 17640899

Reference Proc Natl Acad Sci U S A. 2007 Jul 31;104(31):12772-7.

Author Dwyer JJ, Wilson KL, Davison DK, Freel SA, Seedorff JE, Wring SA, Tvermoes NA, Matthews TJ, Greenberg ML, Delmedico MK.

DOI 10.1073/pnas.0701478104