General Information

General Information

DRAVP ID DRAVPe00523

Peptide Name peptide 6

Sequence ILQQLLFIHFRIGRRRRRRRR

Sequence Length 21

UniProt ID No entry found

Taxon ID None

Source Synthetic construct

Validation Experimentally Validated

Origin Information

Gene Name/ID Not Available

GenBank Not Available

Amino Acid position Not Available

Domain Accession ID Not Available

Nucleotide sequence ID Not Available

Molecular Type Not Available

Chromosomal Position Not Available

Activity Information

Target Organism HIV

Assay Integrase assay

Activity

[Ref.20708407]HIV-1:Inhibition of 3′-processing catalyzed by integrase(IC50=0.10 ± 0.01 µM);inhibition of strand transfer catalyzed by integrase(IC50=0.07 ± 0.01 µM).

Hemolytic Activity No hemolysis information or data found in the reference(s) presented in this entry

Cytotoxicity

No cytotoxicity information or data found in the reference(s) presented in this entry

Binding Target Integrase

Mechanism The peptide acts antiviral activity by inhibiting the activity of integrase.

Structure Information

PDB ID None

Predicted Structure Download DRAVPe00523

Linear/Cyclic Linear

N-terminal Modification Acetylation

C-terminal Modification Amidation

Other Modification None

Stereochemistry L

Physicochemical Information

Formula C126H220N52O24

Absent amino acids ACDEKMNPSTVWY

Common amino acids R

Mass 2847.47

Pl 12.9

Basic residues 10

Acidic residues 0

Hydrophobic residues 8

Net charge 10

Boman Index -11360

Hydrophobicity -98.1

Aliphatic Index 111.43

Half Life

Mammalian:20 hour
Yeast:30 min
E.coli:>10 hour

Extinction Coefficient cystines 0

Absorbance 280nm 0

Polar residues 1

Literature Information

Literature 1

Title Peptidic HIV integrase inhibitors derived from HIV gene products: structure-activity relationship studies.

Pubmed ID 20708407

Reference Bioorg Med Chem. 2010 Sep 15;18(18):6771-5.

Author Suzuki S, Maddali K, Hashimoto C, Urano E, Ohashi N, Tanaka T, Ozaki T, Arai H, Tsutsumi H, Narumi T, Nomura W, Yamamoto N, Pommier Y, Komano JA, Tamamura H.

DOI 10.1016/j.bmc.2010.07.050