General Information


DRAVP ID  DRAVPe00698

Peptide Name   Indolicidin (2-13)[R12P][R13P]

Sequence  LPWKWPWWPWPP

Sequence Length  12

UniProt ID  No entry found

Taxon ID  None

Source  Synthetic construct(derived from Indolicidin)

Validation   Experimentally Validated



Origin Information


Gene Name/ID  Not Available

GenBank  Not Available

Amino Acid position  Not Available

Domain Accession ID  Not Available

Nucleotide sequence ID  Not Available

Molecular Type  Not Available

Chromosomal Position  Not Available



Activity Information


Target Organism  HIV

Assay  HIV-1 integrase inhibition assay

Activity 

  • [Ref.15482931]HIV-1:Inhibition of 3′-processing catalyzed by integrase(IC50=185 µM);inhibition of strand transfer catalyzed by integrase(IC50=215 µM).

Hemolytic Activity  No hemolysis information or data found in the reference(s) presented in this entry

Cytotoxicity 

  • No cytotoxicity information or data found in the reference(s) presented in this entry

Binding Target  HIV Integrase

Mechanism  The HIV-1 integrase plays a crucial role in the HIV-1 virus replication cycle. The peptide can inhibit the activity of integrase and thus inhibit virus replication.



Structure Information


PDB ID  None

Predicted Structure Download  DRAVPe00698

Linear/Cyclic  Linear

N-terminal Modification  Free

C-terminal Modification  Amidtion

Other Modification  None

Stereochemistry  L



Physicochemical Information


Formula  C92H110N18O13

Absent amino acids  ACDEFGHIMNQRSTVY

Common amino acids  PW

Mass  1676

Pl  8.75

Basic residues  1

Acidic residues  0

Hydrophobic residues  6

Net charge  1

Boman Index  1102

Hydrophobicity  -105

Aliphatic Index  32.5

Half Life 

  •     Mammalian:5.5 hour
  •     Yeast:3 min
  •     E.coli:2 min

Extinction Coefficient cystines  27500

Absorbance 280nm  2500

Polar residues  0



Literature Information


Literature 1

Title   Synthesis and HIV-1 integrase inhibitory activity of dimeric and tetrameric analogs of indolicidin.

Pubmed ID   15482931

Reference   Bioorg Med Chem Lett. 2004 Nov 15;14(22):5595-8.

Author   Krajewski K, Marchand C, Long YQ, Pommier Y, Roller PP. 

DOI   10.1016/j.bmcl.2004.08.061