General Information


DRAVP ID  DRAVPe01578

Peptide Name   #4330 derived from HIV-1 integrase

Sequence  KGEAMHGQVDCSPGIWQLDC

Sequence Length  20

UniProt ID  P04587 

Taxon ID  None

Source  Synthetic construct

Validation   Experimentally Validated



Origin Information


Gene Name/ID  Not Available

GenBank  Not Available

Amino Acid position  Not Available

Domain Accession ID  Not Available

Nucleotide sequence ID  Not Available

Molecular Type  Not Available

Chromosomal Position  Not Available



Activity Information


Target Organism  HIV

Assay  Assay for the enzymatic activities of RT

Activity 

  • [Ref.17257575]HIV-1:inhibition of reverse transcriptase(RNA-dependent DNA polymerase) activity(IC50=4 μM);inhibition of reverse transcriptase(DNA-dependent DNA polymerase) activity(IC50=6.8 μM).

Hemolytic Activity  No hemolysis information or data found in the reference(s) presented in this entry

Cytotoxicity 

  • No cytotoxicity information or data found in the reference(s) presented in this entry

Binding Target  Reverse Transcriptase

Mechanism  The peptide could bind the reverse transcriptase and inhibits its DNA-polymerase activity and thus inhibits virus replication.



Structure Information


PDB ID  None

Predicted Structure Download  DRAVPe01578

Linear/Cyclic  Linear

N-terminal Modification  Free

C-terminal Modification  Free

Other Modification  None

Stereochemistry  L



Physicochemical Information


Formula  C91H140N26O30S3

Absent amino acids  FNRTY

Common amino acids  G

Mass  2174.45

Pl  4.54

Basic residues  2

Acidic residues  3

Hydrophobic residues  5

Net charge  -1

Boman Index  -2319

Hydrophobicity  -39.5

Aliphatic Index  58.5

Half Life 

  •     Mammalian:1.3 hour
  •     Yeast:3 min
  •     E.coli:2 min

Extinction Coefficient cystines  5625

Absorbance 280nm  296.05

Polar residues  6



Literature Information


Literature 1

Title   Inhibition of human immunodeficiency virus type-1 reverse transcriptase by a novel peptide derived from the viral integrase.

Pubmed ID   17257575

Reference   Arch Biochem Biophys. 2007 Feb 15;458(2):202-12.

Author   Oz Gleenberg I, Herschhorn A, Goldgur Y, Hizi A.

DOI   10.1016/j.abb.2006.12.007