General Information


DRAVP ID  DRAVPe01579

Peptide Name   #5649 derived from HIV-1 integrase

Sequence  ASCDKCQLKGEAMHG

Sequence Length  15

UniProt ID  P04587 

Source  Synthetic construct



Activity Information


Target Organism  HIV

Assay  Assay for the enzymatic activities of RT

Activity 

  • [Ref.17257575]HIV-1: inhibition of reverse transcriptase(RNA-dependent DNA polymerase) activity(91.5 ± 2.5% residual DNA polymerase activity at 30 μM).

Hemolytic Activity  No hemolysis information or data found in the reference(s) presented in this entry

Cytotoxicity 

  • No cytotoxicity information or data found in the reference(s) presented in this entry

Binding Target  Reverse Transcriptase

Mechanism  The peptide could bind the reverse transcriptase and inhibits its DNA-polymerase activity and thus inhibits virus replication.



Structure Information


PDB ID  None

Predicted Structure Download  DRAVPe01579

Linear/Cyclic  Linear

N-terminal Modification  Free

C-terminal Modification  Free

Other Modification  None

Stereochemistry  L



Physicochemical Information


Formula  C62H104N20O22S3

Absent amino acids  FINPRTVWY

Common amino acids  ACGK

Mass  1577.81

Pl  6.77

Basic residues  3

Acidic residues  2

Hydrophobic residues  3

Net charge  1

Boman Index  -2490

Hydrophobicity  -58.67

Aliphatic Index  39.33

Half Life 

  •     Mammalian:4.4 hour
  •     Yeast:>20 hour
  •     E.coli:>10 hour

Extinction Coefficient cystines  125

Absorbance 280nm  8.93

Polar residues  5



Literature Information


Literature 1

Title   Inhibition of human immunodeficiency virus type-1 reverse transcriptase by a novel peptide derived from the viral integrase.

Pubmed ID   17257575

Reference   Arch Biochem Biophys. 2007 Feb 15;458(2):202-12.

Author   Oz Gleenberg I, Herschhorn A, Goldgur Y, Hizi A.

DOI   10.1016/j.abb.2006.12.007