General Information


DRAVP ID  DRAVPe01602

Peptide Name   Rex (1-21) -RTD

Sequence  MPKTRRRPRRSQRKRPPTPWPYGRKKRRQRRR

Sequence Length  32

UniProt ID  P0C207  P04612 

Taxon ID  None

Source  Synthetic construct

Validation   Experimentally Validated



Origin Information


Gene Name/ID  Not Available

GenBank  Not Available

Amino Acid position  Not Available

Domain Accession ID  Not Available

Nucleotide sequence ID  Not Available

Molecular Type  Not Available

Chromosomal Position  Not Available



Activity Information


Target Organism  HIV

Assay  MAGI assay

Activity 

  • [Ref.20580677]HIV-1 IIIB:inhibition of virus replication in PM1-CCR5 cells(EC50=2.5±0.76 μM);
  • HIV-1 Bal:inhibition of virus replication in PM1-CCR5 cells(EC50>10 μM).

Hemolytic Activity  No hemolysis information or data found in the reference(s) presented in this entry

Cytotoxicity 

  • No cytotoxicity information or data found in the reference(s) presented in this entry

Binding Target  Not found

Mechanism  Peptide derived from the RNA-binding domain of HIV-1 Rev can act as dual-target inhibitors that inhibit HIV-1 entry and viral production in the early and late phases of replication. 



Structure Information


PDB ID  None

Predicted Structure Download  DRAVPe01602

Linear/Cyclic  Linear

N-terminal Modification  Free

C-terminal Modification  Free

Other Modification  None

Stereochemistry  L



Physicochemical Information


Formula  C180H314N78O39S

Absent amino acids  ACDEFHILNV

Common amino acids  R

Mass  4227.03

Pl  12.74

Basic residues  17

Acidic residues  0

Hydrophobic residues  1

Net charge  17

Boman Index  -23030

Hydrophobicity  -292.5

Aliphatic Index  0

Half Life 

  •     Mammalian:30 hour
  •     Yeast:>20 hour
  •     E.coli:>10 hour

Extinction Coefficient cystines  6990

Absorbance 280nm  225.48

Polar residues  5



Literature Information


Literature 1

Title   Rev-derived peptides inhibit HIV-1 replication by antagonism of Rev and a co-receptor, CXCR4.

Pubmed ID   20580677

Reference   Int J Biochem Cell Biol. 2010 Sep;42(9):1482-8.

Author   Shimane K, Kodama EN, Nakase I, Futaki S, Sakurai Y, Sakagami Y, Li X, Hattori T, Sarafianos SG, Matsuoka M.

DOI   10.1016/j.biocel.2010.05.005