General Information


DRAVP ID  DRAVPe01980

Peptide Name   LEDGF/p75 (355-377)

Sequence  IHAEIKNSLKIDNLDVNRCIEAL

Sequence Length  23

UniProt ID  O75475 

Taxon ID  None

Source  Synthetic construct

Validation   Experimentally Validated



Origin Information


Gene Name/ID  Not Available

GenBank  Not Available

Amino Acid position  Not Available

Domain Accession ID  Not Available

Nucleotide sequence ID  Not Available

Molecular Type  Not Available

Chromosomal Position  Not Available



Activity Information


Target Organism  HIV

Assay  IN enzymatic assay

Activity 

  • [Ref.18331842]Human immunodeficiency virus (HIV): Inhibition of integrase activity (3' end processing)(IC50=165±28 µM); inhibition of integrase activity(strand transfer)(IC50=153±28 µM).

Hemolytic Activity  No hemolysis information or data found in the reference(s) presented in this entry

Cytotoxicity 

  • No cytotoxicity information or data found in the reference(s) presented in this entry

Binding Target  Integrase

Mechanism  The LEDGF/p75 peptide modestly inhibited IN catalysis and was dependent on IN–DNA assembly. The peptide was also effective at disrupting LEDGF/p75–IN complex formation.



Structure Information


PDB ID  None

Predicted Structure Download  No predicted structure available

Linear/Cyclic  Linear

N-terminal Modification  Free

C-terminal Modification  Free

Other Modification  None

Stereochemistry  L



Physicochemical Information


Formula  C113H193N33O36S

Absent amino acids  FGMPQTWY

Common amino acids  I

Mass  2622.03

Pl  5.48

Basic residues  4

Acidic residues  4

Hydrophobic residues  10

Net charge  0

Boman Index  -4168

Hydrophobicity  -4.78

Aliphatic Index  140

Half Life 

  •     Mammalian:20 hour
  •     Yeast:30 min
  •     E.coli:>10 hour

Extinction Coefficient cystines  0

Absorbance 280nm  0

Polar residues  5



Literature Information


Literature 1

Title   Inhibitory profile of a LEDGF/p75 peptide against HIV-1 integrase: insight into integrase-DNA complex formation and catalysis.

Pubmed ID   18331842

Reference   FEBS Lett. 2008 Apr 30;582(10):1425-30.

Author   Al-Mawsawi LQ, Christ F, Dayam R, Debyser Z, Neamati N.

DOI   10.1016/j.febslet.2008.02.076